Physics - Biological Physics / iPoLS / STC-QCB Seminar

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Physics of Living Cells Seminar - "Real-time Quantification of Gene Expression With Single-molecule Precision in Living Cells"

Event Type
Lecture
Sponsor
UIUC Center for the Physics of Living Cells(CPLC)/International Physics of Living Systems(iPoLS)
Virtual
wifi event
Date
Sep 25, 2020   2:00 pm  
Speaker
Timothy Stasevich, Colorado State University
Contact
Sharlene Denos
E-Mail
denos@illinois.edu
Phone
217-244-0672
Views
50


My lab is creating technology to image gene expression in real time and with single-molecule 
precision  in  living  cells.  Using  tandem-repeat  mRNA  and  protein  tags,  genetically  
encoded intrabodies,  and  single-molecule  microscopy,  we  now  regularly  image  the  live-cell  
translation dynamics of single mRNAs. In this talk, I will introduce our technology and describe 
how it can be used to amplify fluorescent signals within single translation sites. I will show how 
we quantify these signals to determine the size, shape, subcellular localization, and mobilities of 
translation sites, as well as their ribosomal densities and translational initiation and elongation 
kinetics. I will then highlight a few recent applications of our technology, including the imaging 
of translation shutdown during cellular stress, HIV-1 translational frameshifting, and 
non-canonical translation initiation at internal ribosomal entry sites. I will conclude by 
discussing new intrabodies my lab has engineered that bind the classic HA and FLAG epitopes in 
living cells. As these intrabodies can  be  encoded  on  plasmids,  they  can  easily  be  adapted  
by  other  labs  to  image  translation  in multiple colors and in diverse living systems.


Timothy J. Stasevich is an Associate Professor in the Department of Biochemistry and Molecular 
Biology at Colorado State University (CSU). His lab uses a combination of advanced fluorescence 
microscopy,  genetic  engineering,  and  computational  modeling  to  study  the  dynamics  of  
gene regulation  in  living  mammalian  cells.  His  lab  helped  pioneer  the  imaging  of  
real-time  single- mRNA  translation  dynamics  in  living  cells¹.  Dr.  Stasevich  received  his  
B.S.  in  Physics  and Mathematics  from  the  University  of  Michigan,  Dearborn,  and  his  Ph.  
D.  in  Physics  from  the University of Maryland,  College Park.  He transitioned into 
experimental biophysics as a post- doctoral research fellow in the laboratory of Dr. James G. 
McNally at the National Cancer Institute. During this time, he developed technology based on 
fluorescence microscopy to help establish gold-standard measurements of live-cell protein dynamics. 
Dr. Stasevich next moved to Osaka University, where he worked with Dr. Hiroshi Kimura as a Japan 
Society for the Promotion of Science Foreign Postdoctoral Research Fellow. While there, he helped 
create technology to image endogenous proteins and their post-translation modifications in vivo. 
This allowed him to image the live-cell dynamics of epigenetic histone modifications during gene 
activation for the first time². Before joining the faculty at CSU, Dr. Stasevich spent a year as a 
Visiting Fellow at the HHMI Janelia Research Campus, where he applied superresolution fluorescence 
microscopy to improve the spatiotemporal resolution of endogenous protein imaging in live cells.


1. Morisaki, T. et al. Real-time quantification of single RNA translation dynamics in living cells.Science 352, 1425–1429 (2016).
2. Stasevich, T. J. et al. Regulation of RNA polymerase II activation by histone acetylation in 
single living cells. Nature 516, 272–275 (2014).

This lecture will be held via ZOOM:

Meeting ID: 996 8526 5039, Password: 480845

Please contact Sharlene Denos at denos@illinois.edu with questions or for more information.

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